Image source: Figure 7.1, Gene Cloning & DNA Analysis- An Introduction, T.A.Brown. fifth edition, blackwell publishing, 2010
The 2 µm plasmid is an excellent basis for a cloning vector. [4] It is 6 kb in size and has a high copy number of between 70 and 200.
Replication makes use of a plasmid origin, several enzymes provided by the host cell, and the proteins coded by the REP1 and REP2 genes carried by the plasmid. [4]
However, all is not perfectly straightforward in using the 2 µm plasmid as a cloning vector. [4]
First, there is the question of a selectable marker. [4] For this purpose a normal yeast gene is used, generally one that codes for an enzyme involved in amino acid biosynthesis. An example is the gene LEU2, which codes for β-isopropyl-malate dehydrogenase, one of the enzymes involved in the conversion of pyruvic acid to leucine. [4]
In order to use LEU2 as a selectable marker, a special kind of host organism is needed. The host must be an auxotrophic mutant that has a non-functional LEU2 gene. [4]
Such a leu2− yeast is unable to synthesize leucine and can survive only if this amino acid is supplied as a nutrient in the growth medium. Selection is possible because transformants contain a plasmid-borne copy of the LEU2 gene, and so are able to grow in the absence of the amino acid. [4] In a cloning experiment, cells are plated out onto minimal medium, which contains no added amino acids. Only transformed cells are able to survive and form colonies and thus are easily differentiated.